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perseus:user:activities:matrixprocessing:annotcolumns:backtobaseidentifiers

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perseus:user:activities:matrixprocessing:annotcolumns:backtobaseidentifiers [2014/11/10 17:26]
temu
perseus:user:activities:matrixprocessing:annotcolumns:backtobaseidentifiers [2015/11/23 14:47] (current)
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-{{page>​perseus:​noedit:​activities:​matrixprocessing:​annotcolumns:​backtobaseidentifiers}}+{{page>​perseus:​noedit:user:​activities:​matrixprocessing:​annotcolumns:​backtobaseidentifiers}}
 <!-- This comment and the line above it must be preserved when editing this file! <!-- This comment and the line above it must be preserved when editing this file!
 The recommended sections are these, but they may be changed on a case by case basis. The recommended sections are these, but they may be changed on a case by case basis.
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 ===== Parameters ===== ===== Parameters =====
 ==== Source ==== ==== Source ====
 +Specified path to the file containing the annotations that should be mapped back to the base identifiers (default: first file in Perseus-version/​conf/​annotations/​). The file should be the same that was used to add the annotations,​ also it can be selected from all files in Perseus-version/​conf/​annotations/​. ​
  
 ==== Identifiers ==== ==== Identifiers ====
 +Selected text column containing the identifiers that should be matched back to UniProt identifiers (default: first text column in the matrix).
 +
 +__Comment:​__ Only text columns can matched back __not__ categorical ones, because there is no unique match.
  
 ==== Identifier type ==== ==== Identifier type ====
 +Selected type of the identifiers that will be mapped back (default: Gene name).
 +The identifier type can be selected from a predefined list:
 +  * ENSG
 +  * ENSP
 +  * ENST
 +  * Flybase
 +  * Gene name
 +  * MGI
 +  * PDB
 +  * UniProt names
 +  * Wormbase
 +  * EC
 +  * eggNOG
  
 ==== Parameter window ==== ==== Parameter window ====
 +{{ perseus:​user:​activities:​matrixprocessing:​annotcolumns:​modifications-to_base_identifiers-edited.png?​direct |Perseus pop-up window: Modifications -> To base identifiers}}
perseus/user/activities/matrixprocessing/annotcolumns/backtobaseidentifiers.1415636774.txt.gz · Last modified: 2015/11/23 14:43 (external edit)