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perseus:user:activities:matrixprocessing:annotcolumns:backtobaseidentifiers

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Parameters

Source

Specified path to the file containing the annotations that should be mapped back to the base identifiers (default: first file in Perseus-version/conf/annotations/). The file should be the same that was used to add the annotations, also it can be selected from all files in Perseus-version/conf/annotations/.

Identifiers

Selected text column containing the identifiers that should be matched back to UniProt identifiers (default: first text column in the matrix).

Comment: Only text columns can matched back not categorical ones, because there is no unique match.

Identifier type

Selected type of the identifiers that will be mapped back (default: Gene name). The identifier type can be selected from a predefined list:

  • ENSG
  • ENSP
  • ENST
  • Flybase
  • Gene name
  • MGI
  • PDB
  • UniProt names
  • Wormbase
  • EC
  • eggNOG

Parameter window

Perseus pop-up window: Modifications -> To base identifiers

perseus/user/activities/matrixprocessing/annotcolumns/backtobaseidentifiers.1447935699.txt.gz · Last modified: 2015/11/23 14:43 (external edit)